HEATSTER - a platform for heat stress transcription factors (HSF) classification and visualization
The HEATSTER platform aims to offer different webtools and datasets for the identification, description, and characterization of heat stress transcription factors (HSFs).
Therefore, different tools for classification and visualization are offered:
Further, the platform's database provides a manually curated dataset that includes 848 plant HSF sequences
from 33 plant species (database version 1.0) and an extended dataset of 65 species (database version 2.0).
Beside the HSFs derived of different species, class specific motif set are provided.
In plants, HSFs have evolved in a complex manner (Nover et al. , 1996, 2001; Figure 3). The three different HSF classes HsfA, HsfB and HsfC are characterized by
specific sequences and composition of their functional domains involved in:
Critical comments and suggestions for further improvement are highly appreciated. Refer to Stefan Simm or to Ingo Ebersberger for HSF-related queries and bioinformatics aspects.
Homepage: 2.0
Database: version 1.0 and 2.0 included.
Refer to:
Stefan Simm
or
Ingo Ebersberger