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compgenomics:modul1 [2025/05/16 07:24] – [Analysis] felixcompgenomics:modul1 [2025/09/23 13:09] (current) – felix
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 === Task 2: How are they related to each other? === === Task 2: How are they related to each other? ===
  
-  - Extract the information from the "taxid" column and save it in a ''.txt'' file+  - Extract the information from the "taxid" column and save it in a ''.txt'' file<WRAP> 
 +<hidden SPOILER> 
 +[[compgenomics:modul1:taxidfile|Download file with taxids from here]] 
 +</hidden></WRAP>
   - Go to [[https://www.ncbi.nlm.nih.gov/Taxonomy/CommonTree/wwwcmt.cgi|NCBI CommonTree]] and upload your ''.txt'' file (-> menu: **Add from file**)   - Go to [[https://www.ncbi.nlm.nih.gov/Taxonomy/CommonTree/wwwcmt.cgi|NCBI CommonTree]] and upload your ''.txt'' file (-> menu: **Add from file**)
   - Download the tree in Phylip format (-> menu: **save as -> phylip tree**)   - Download the tree in Phylip format (-> menu: **save as -> phylip tree**)