FastQCFastQC Report
Fri 17 Sep 2021
AVT98_1P.fq

Summary

[OK] Basic Statistics

Measure Value
Filename AVT98_1P.fq
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 3876439
Filtered Sequences 0
Sequence length 50-150
%GC 52

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[WARN] Per base sequence content

Per base sequence content

[WARN] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[OK] Overrepresented sequences

No overrepresented sequences

[WARN] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
TTTTT 1455285 3.436012 4.102765 7
AAAAA 1466685 3.3838503 4.736798 1
Produced by FastQC (version 0.10.1)